CDS

Accession Number TCMCG051C31149
gbkey CDS
Protein Id XP_002314949.2
Location join(15574151..15576230,15577905..15578712,15579222..15579515,15580294..15580516)
Gene LOC7485825
GeneID 7485825
Organism Populus trichocarpa

Protein

Length 1134aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_002314913.3
Definition phytochrome B isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category K
Description Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
KEGG_ko ko:K12121        [VIEW IN KEGG]
ko:K12122        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04712        [VIEW IN KEGG]
map04712        [VIEW IN KEGG]
GOs GO:0001101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003682        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006066        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006714        [VIEW IN EMBL-EBI]
GO:0006720        [VIEW IN EMBL-EBI]
GO:0006721        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006833        [VIEW IN EMBL-EBI]
GO:0006873        [VIEW IN EMBL-EBI]
GO:0006874        [VIEW IN EMBL-EBI]
GO:0006875        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007602        [VIEW IN EMBL-EBI]
GO:0007623        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009409        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009581        [VIEW IN EMBL-EBI]
GO:0009582        [VIEW IN EMBL-EBI]
GO:0009583        [VIEW IN EMBL-EBI]
GO:0009585        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009606        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009629        [VIEW IN EMBL-EBI]
GO:0009630        [VIEW IN EMBL-EBI]
GO:0009637        [VIEW IN EMBL-EBI]
GO:0009638        [VIEW IN EMBL-EBI]
GO:0009639        [VIEW IN EMBL-EBI]
GO:0009640        [VIEW IN EMBL-EBI]
GO:0009642        [VIEW IN EMBL-EBI]
GO:0009645        [VIEW IN EMBL-EBI]
GO:0009649        [VIEW IN EMBL-EBI]
GO:0009687        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009753        [VIEW IN EMBL-EBI]
GO:0009755        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009867        [VIEW IN EMBL-EBI]
GO:0009881        [VIEW IN EMBL-EBI]
GO:0009883        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010017        [VIEW IN EMBL-EBI]
GO:0010018        [VIEW IN EMBL-EBI]
GO:0010029        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010114        [VIEW IN EMBL-EBI]
GO:0010148        [VIEW IN EMBL-EBI]
GO:0010161        [VIEW IN EMBL-EBI]
GO:0010202        [VIEW IN EMBL-EBI]
GO:0010218        [VIEW IN EMBL-EBI]
GO:0010244        [VIEW IN EMBL-EBI]
GO:0010374        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010617        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0015979        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0017006        [VIEW IN EMBL-EBI]
GO:0017007        [VIEW IN EMBL-EBI]
GO:0017012        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019725        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0030003        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031347        [VIEW IN EMBL-EBI]
GO:0031516        [VIEW IN EMBL-EBI]
GO:0031517        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032787        [VIEW IN EMBL-EBI]
GO:0032870        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0038023        [VIEW IN EMBL-EBI]
GO:0042044        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042592        [VIEW IN EMBL-EBI]
GO:0042752        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0042803        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043288        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0046983        [VIEW IN EMBL-EBI]
GO:0048511        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048580        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048878        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050801        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051480        [VIEW IN EMBL-EBI]
GO:0051606        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055065        [VIEW IN EMBL-EBI]
GO:0055074        [VIEW IN EMBL-EBI]
GO:0055080        [VIEW IN EMBL-EBI]
GO:0055082        [VIEW IN EMBL-EBI]
GO:0060089        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071229        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071395        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071482        [VIEW IN EMBL-EBI]
GO:0071489        [VIEW IN EMBL-EBI]
GO:0071490        [VIEW IN EMBL-EBI]
GO:0071491        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0072503        [VIEW IN EMBL-EBI]
GO:0072507        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0090558        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098771        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:1900140        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901615        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901701        [VIEW IN EMBL-EBI]
GO:1902644        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:1990841        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000028        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2000241        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCATCACAATCACAAAGGCAAAGCAATCAGCCGGTACATAATCAAGCTCAGTCTTCGGGTACCAGTAACATGAGGCAACACCATCACGCCACAGAATCAGTAAGCAAAGCAATTGCACAATACACAGTCGATGCACAACTCCATGCAGTTTTTGAACAATCTGGTGGCACTGGTAGGTCATTTGATTACTCAAAGTCTGTTAGAACTACTAACCAGTCAGTACCTGAACAACAAATCACAGCGTATTTGTCAAAAATTCAAAGGGGTGGTCATATTCAGCCATTTGGGTGCATGATTGCTGCAGATGAACAGTCTTTTAGGGTCATTGCGTATAGCGAAAACGCCAAAGATATGCTTGGTTTAACTCCACAATCAGTCCCTTCTTTAGAGAAACAAGAAATTCTCTTTGTTGGGGCTGATGTAAGGATTCTTTTTAGGCCTTCCAGCGCTGTTTTGCTTGAAAAAGCATTTGGTGCAAGGGAAATAACATTGTTGAATCCAATTTGGATTCATTCCAAGAATTCCGGGAAGCCCTTTTACGCAATTTTGCATAGGATTGATGTTGGTATTGTTATTGATTTAGAGCCTGCTAGGACTGAAGACCCTGCTTTATCTATAGCAGGGGCTGTTCAGTCTCAGAAGTTAGCAGTTCGTGCGATTTCACAATTACAATCACTTCCTGGTGGGGATATTAAGTTATTATGTGATACTGTTGTGGACAGTGTGAGAGAGCTTACCGGGTATGATAGAGTTATGGTTTATAAGTTTCATGAGGACGAGCATGGTGAGGTTGTCGCTGAGAATAAAAGGGTTGATTTGGAACCTTATATCGGTTTGCATTATCCTTCCACGGATATACCACAAGCTTCGAGGTTTTTGTTCAAGCAGAATAGGGTTAGGATGATTGTGGATTGTCATGCTATACCGGTCCGTGTTATTCAGGATGAGGCGCTTATGCAGCCTTTATGCTTGGTTGGTTCGACTCTTCGTGCTCCTCACGGTTGTCATGCTCAGTATATGGAGAATATGGGGTCGATTGCTTCATTGGCCATGGCTGTTATTATTTATGGAAATGATGAAGAAGCTATCGGTGGGAGGAACTCGATGAGGCTTTGGGGTTTGGTTGTTTGCCATCACACTTCTGCTAGGTGTATTCCATTTCCGCTTCGTTATGCGTGTGAGTTCTTAATGCAGGCTTTCGGGCTTCAATTGAACATGGAATTGCAGTTGGCATCGCAGTTGTTGGAGAAACATGTCTTGAGGACTCAGACTCTCTTATGTGATATGCTTCTCCGCGACTCTCCTACTGGCATTGTTACTCAAAGTCCAAGTATCATGGACCTTGTGAAGTGTGATGGGGCAGCTCTTTATTACCAGGGGCAGTATTACCCTTTAGGCGTGACCCCAACTGAAACCCAAATAAAAGATATTGTGGAGTGGTTGTTGACCCTTCATGGAGACCCAACTGGATTAAGCACTGACAGTTTGGCCGATGCTGGGTATCCTGGGGCAGCCTTTCTCGGCGATGCAGTTTGTGGGATGGCTGTTGCTTATATTGCTGAGAGAGATTTTCTTTTTTGGTTTCGGTCTCACACTGCAAAGGAGGTCAAATGGGGTGGTGCGAAGCATCACCCAGAGGACAAGGATGATGGGCAGAGGATGCATCCGCGTTCATCATTCAAGGCATTCTTAGAGGTGGTGAAGAGCCGGAGTTTACCGTGGGAGAATGCAGAAATGGATGCCATTCATTCTTTGCAGCTTATTTTGCGAGACTCATTTAGGGATGCTGAAGCAACCAATTCTAAGGCTGTTGTACATACCCAGCTCAAGGATATGGAATTGCAAGGTATGGATGAGCTCAGTTCGGTTGCAAGAGAAATGGTTAGACTAATAGAGACTGCAACTGCTCCGATATTTGCTGTAGACGTTGATGGCCGCATAAACGGGTGGAATGCAAAGGTTGCTGAGTTGACTGGACTCTCAGTTGAGGAAGCCATGGGGAAGTCTTTGGTTCACGATCTTGTTTATAAGGAATATGAAGAAATTGTTGACAAGCTTATTCATCGTGCAGTAAAAGGCGAAGAAGATAAGAACGTGGAGATAAAATTGAGGACCTTTTGCTCTGAACACCAAAAGAAGGCTGTTTTTGTGGTGGTAAATGCTTGTTCGAGCAAGGATTACATGGATAATATAGTTGGGGTTTGCTTTGTTGGTCAGGATATTACAGGTCAAAAAGTGGTAATGGACAAATACGTCCTTATACAAGGTGATTATAAGGCTATTGTACACAGTCCCAATCCTTCGATCCCTCCGATTTTTGCTTCAGATGAGAACACATGTTGCTTGGAGTGGAACACTGCCATGGAAAAACTCACAGGATGGTCCAGGGGCGAAGTTGTTGGGAAGATGTTGGTTGGGGAGGTTTTTGGCAGTTGCTGTAGGCTCAAGGGTCCAGATGCACTGACAAAATTCATGATTGCCCTGCACAATGCAATTGGAGGGATAGATACAGACAAGTTACCCTTTTCATTCTTTGACCGGAATGAAAAAAATGTGCAAACTCTCTTGACAGCTAACAAGAGGGTTAATATGGAGGGAGATATTATTGGAGCCTTCTGCTTCTTGCAGATTGCAAGTCCTGAGTTGCAGCAAACTTTGAAAGTTCAGAAACAGCAGGAAAAAAAAAGCTTTGCAAGGATGAAAGAGTTGGCTTACATTTGCCAGGAAATAAAAAATCCTTTAAGTGGTATACACTTTACCAACTCGCTTTTGGAGAACACAGACTTGACTGAAGATCAACAGCAGTTTCTCGAGACTAGTGCTGCATGTGAAAAACAGATATTGAAGATCATACGAGACATTGATCTTGAGAGCATTGAAAATGGTTCACTGGAGCTTGAGAAGGCTGAATTTTTACTTGGGAGTGTCATAAATGCTGTTGTTAGCCAAGCAATGCTATTGCTGAGGGAAAGAAATCTACAATTGCTTCGTGATATTCCAGAAGAAATAAAAACGCTGGCAGTTTATGGTGATCAGGCAAGAATTCAACAAGTATTGGCTGATTTCTTGTTGAATATGGTGCGTTATGCTCCATCTTCAGCAGGTTGGGTGGAGATTCATGTTTGTCCAACACTGAAGCAAATCTCTGATGGACACACTCTCGTGCATACAGAGTTCAAGATTGTTTGCCCTGGTGAAGGTCTTCCTCCTGAATTAGTTCAAGACATGTTCCATAGTAGTAGATGGGTTACTCAAGAGGGCCTAGGGCTCAGCATGTGCAGGAAGATCTTAAAGCTAATGAATGGTGAAGTCCAATATATTAGAGAGTCAGAAAGATGCTATTTCTTAGTTGTCCTCGAAGTACCCATGCCTCAAAAAGTTGGAAAGGGTGCTGCAGACTAG
Protein:  
MASQSQRQSNQPVHNQAQSSGTSNMRQHHHATESVSKAIAQYTVDAQLHAVFEQSGGTGRSFDYSKSVRTTNQSVPEQQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDMLGLTPQSVPSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVDSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHAIPVRVIQDEALMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGNDEEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTETQIKDIVEWLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEATNSKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTGLSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVVNACSSKDYMDNIVGVCFVGQDITGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENTCCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGIDTDKLPFSFFDRNEKNVQTLLTANKRVNMEGDIIGAFCFLQIASPELQQTLKVQKQQEKKSFARMKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESIENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVLADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFKIVCPGEGLPPELVQDMFHSSRWVTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLVVLEVPMPQKVGKGAAD